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  5. Sopen11g005110

Sopen11g005110


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g005110
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
A4A49_18662 No alias ring-h2 finger protein atl8 0.02 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
Bradi5g11880 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03736.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G01336.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I04244.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.06G150400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G143350 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Glyma.11G172300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os10g39450 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02210 No alias RING finger protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
Potri.007G064400 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Pp1s71_162V6 No alias ring finger 0.03 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G275400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G205400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g088440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g067700 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g082420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.02 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001300 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 38 81
No external refs found!