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  5. Sopen11g005120

Sopen11g005120


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g005120
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
A4A49_05710 No alias transcription factor bhlh96 0.04 Orthogroups_2024-Update
Brara.B02008.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G417164 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G208300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G231800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os02g52190 No alias helix-loop-helix DNA-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G101900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G097600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G128100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sopen05g032160 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 97 148
No external refs found!