1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_26573

A4A49_26573


Description : putative e3 ubiquitin-protein ligase ari10


Gene families : OG_42_0008555 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008555_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_26573
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G020000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Solyc02g069230 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G19670.7) 0.04 Orthogroups_2024-Update
Sopen02g018390 No alias IBR domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 379 427
IPR002867 IBR_dom 299 358
IPR018957 Znf_C3HC4_RING-type 219 263
IPR002156 RNaseH_domain 89 200
No external refs found!