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  5. A4A49_26820

A4A49_26820


Description : rhomboid-like protein 1


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_26820
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Bradi2g03110 No alias RHOMBOID-like 1 0.02 Orthogroups_2024-Update
Brara.F00836.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Glyma.20G156400 No alias RHOMBOID-like 2 0.03 Orthogroups_2024-Update
HORVU4Hr1G086150.3 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
LOC_Os01g05430 No alias OsRhmbd1 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
MA_128457g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G241300 No alias RHOMBOID-like 1 0.04 Orthogroups_2024-Update
Solyc11g013320 No alias Rhomboid-like protein (AHRD V3.3 *** K4D6D6_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 118 259
No external refs found!