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  5. A4A49_27287

A4A49_27287


Description : protein spa1-related 3


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_27287
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
A4A49_12413 No alias e3 ubiquitin-protein ligase cop1 0.03 Orthogroups_2024-Update
Brara.A03144.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
Brara.D01997.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G145556 No alias SPA1-related 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G068840.7 No alias component *(SPA) of substrate adaptor module of... 0.02 Orthogroups_2024-Update
HORVU6Hr1G079670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.001G399600 No alias SPA1-related 3 0.03 Orthogroups_2024-Update
Pp1s11_401V6 No alias ubiquitin ligase protein 0.03 Orthogroups_2024-Update
Seita.3G139600.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
Solyc07g063120 No alias Ubiquitin ligase protein cop1, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen07g031310 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update
evm.model.tig00020964.35 No alias (at2g32950 : 280.0) Represses photomorphogenesis and... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 657 692
IPR001680 WD40_repeat 741 776
No external refs found!