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  5. Sopen11g005850

Sopen11g005850


Description : NB-ARC domain


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g005850
Cluster HCCA clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
A4A49_18482 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
A4A49_22862 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_32821 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
A4A49_33079 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
At1g31540 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
At1g57630 No alias Disease resistance protein RPP1-WsB, putative... 0.03 Orthogroups_2024-Update
At1g72920 No alias Similar to part of disease resistance protein... 0.03 Orthogroups_2024-Update
At4g19500 No alias Disease resistance protein RPP2A... 0.02 Orthogroups_2024-Update
At5g41540 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Brara.G03299.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.I04818.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G125400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.02G041800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.03G075300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.08G190567 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.08G192900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.09G057000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.12G132400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G136000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G212300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.18G116601 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.20G206200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
MA_456384g0010 No alias (at1g17615 : 124.0) Disease resistance protein (TIR-NBS... 0.03 Orthogroups_2024-Update
Potri.002G056050 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.013G097900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.014G064300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.019G069500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T004950 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T011750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Sopen01g045290 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 217 434
IPR002182 NB-ARC 1322 1543
IPR000157 TIR_dom 32 205
IPR000157 TIR_dom 1137 1310
IPR001611 Leu-rich_rpt 2029 2066
No external refs found!