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A4A49_27543


Description : putative atp-dependent dna helicase chr12


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_27543
Cluster HCCA clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
130534 No alias chromatin remodeling 4 0.02 Orthogroups_2024-Update
A4A49_56777 No alias chd3-type chromatin-remodeling factor pickle 0.03 Orthogroups_2024-Update
Cre16.g647602 No alias chromatin remodeling 1 0.02 Orthogroups_2024-Update
Pp1s166_101V6 No alias chromodomain helicase dna binding protein 6 0.05 Orthogroups_2024-Update
Pp1s293_34V6 No alias chromodomain helicase dna binding protein 1-like 0.03 Orthogroups_2024-Update
Pp1s65_183V6 No alias chromatin remodeling complex subunit 0.01 Orthogroups_2024-Update
Seita.6G108300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen01g031470 No alias SNF2 family N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0042393 histone binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_N 442 718
IPR029295 SnAC 931 1007
IPR001650 Helicase_C 738 851
No external refs found!