A4A49_27621

Description : agamous-like mads-box protein agl9

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_27621
Cluster	HCCA clusters: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
121275	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
A4A49_09228	No alias	mads-box protein jointless	0.03	Orthogroups_2024-Update
A4A49_14235	No alias	developmental protein sepallata 1	0.06	Orthogroups_2024-Update
A4A49_14828	No alias	agamous-like mads-box protein agl104	0.04	Orthogroups_2024-Update
A4A49_15806	No alias	developmental protein sepallata 1	0.03	Orthogroups_2024-Update
A4A49_16645	No alias	agamous-like mads-box protein agl11	0.04	Orthogroups_2024-Update
A4A49_18989	No alias	agamous-like mads-box protein agl19	0.05	Orthogroups_2024-Update
A4A49_19521	No alias	developmental protein sepallata 1	0.03	Orthogroups_2024-Update
A4A49_22632	No alias	floral homeotic protein agamous	0.03	Orthogroups_2024-Update
At1g01530	No alias	AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04]	0.03	Orthogroups_2024-Update
At1g77950	No alias	AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6]	0.03	Orthogroups_2024-Update
At1g77980	No alias	Agamous-like MADS-box protein AGL66...	0.03	Orthogroups_2024-Update
At2g24840	No alias	Agamous-like MADS-box protein AGL61...	0.05	Orthogroups_2024-Update
At2g34440	No alias	AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]	0.03	Orthogroups_2024-Update
At2g45650	No alias	AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3]	0.03	Orthogroups_2024-Update
At4g09960	No alias	K-box region and MADS-box transcription factor family...	0.02	Orthogroups_2024-Update
At5g20240	No alias	Floral homeotic protein PISTILLATA...	0.03	Orthogroups_2024-Update
At5g51860	No alias	MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5]	0.02	Orthogroups_2024-Update
At5g60440	No alias	Agamous-like MADS-box protein AGL62...	0.03	Orthogroups_2024-Update
At5g60910	No alias	Agamous-like MADS-box protein AGL8...	0.03	Orthogroups_2024-Update
Bradi4g34680	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Brara.C00582.1	No alias	MADS/AGL-type transcription factor	0.05	Orthogroups_2024-Update
Brara.D00221.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Brara.D02757.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03360.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.H01578.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02103.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.I02486.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G171365	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Glyma.01G064100	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.02G185500	No alias	AGAMOUS-like 18	0.03	Orthogroups_2024-Update
Glyma.05G050700	No alias	AGAMOUS-like 19	0.03	Orthogroups_2024-Update
Glyma.05G163200	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Glyma.06G117600	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.07G080900	No alias	AGAMOUS-like 20	0.02	Orthogroups_2024-Update
Glyma.07G081300	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
Glyma.08G282500	No alias	AGAMOUS-like 29	0.04	Orthogroups_2024-Update
Glyma.09G266400	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
Glyma.10G085100	No alias	AGAMOUS-like 62	0.04	Orthogroups_2024-Update
Glyma.10G240500	No alias	AGAMOUS-like 42	0.04	Orthogroups_2024-Update
Glyma.13G034100	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.17G081200	No alias	AGAMOUS-like 8	0.03	Orthogroups_2024-Update
Glyma.18G004700	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.20G136600	No alias	AGAMOUS-like 62	0.04	Orthogroups_2024-Update
Glyma.20G136700	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
HORVU1Hr1G008300.3	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G110470.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os01g10504	No alias	OsMADS3 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g38780	No alias	transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g49150	No alias	OsMADS17 - MADS-box family gene with MIKCc type-box, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g11414	No alias	OsMADS58 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g21880	No alias	OsMADS74 - MADS-box family gene with M-alpha type-box, expressed	0.02	Orthogroups_2024-Update
MA_211156g0010	No alias	(q40885\|ag_pethy : 164.0) Floral homeotic protein...	0.03	Orthogroups_2024-Update
MA_35712g0010	No alias	(at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all...	0.03	Orthogroups_2024-Update
Potri.001G112400	No alias	AGAMOUS-like 19	0.02	Orthogroups_2024-Update
Potri.002G062000	No alias	AGAMOUS-like 61	0.04	Orthogroups_2024-Update
Potri.004G002400	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.004G064300	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Potri.004G130900	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.007G115000	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.009G084200	No alias	AGAMOUS-like 62	0.04	Orthogroups_2024-Update
Potri.013G104900	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Pp1s267_56V6	No alias	agamous-like protein	0.02	Orthogroups_2024-Update
Seita.3G280400.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Seita.4G093200.1	No alias	MADS/AGL-type transcription factor	0.01	Orthogroups_2024-Update
Seita.4G163500.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G156800.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G193300.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Sobic.010G221500.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g103550	No alias	LOW QUALITY:Transcription factor, MADS-box (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen02g033990	No alias	SRF-type transcription factor (DNA-binding and...	0.03	Orthogroups_2024-Update
Sopen08g021160	No alias	SRF-type transcription factor (DNA-binding and...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	92	173

External Links

No external refs found!

A4A49_27621

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation