A4A49_27621


Description : agamous-like mads-box protein agl9


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_27621
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
121275 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
A4A49_09228 No alias mads-box protein jointless 0.03 Orthogroups_2024-Update
A4A49_14235 No alias developmental protein sepallata 1 0.06 Orthogroups_2024-Update
A4A49_14828 No alias agamous-like mads-box protein agl104 0.04 Orthogroups_2024-Update
A4A49_15806 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_16645 No alias agamous-like mads-box protein agl11 0.04 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.05 Orthogroups_2024-Update
A4A49_19521 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.03 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.03 Orthogroups_2024-Update
At1g77980 No alias Agamous-like MADS-box protein AGL66... 0.03 Orthogroups_2024-Update
At2g24840 No alias Agamous-like MADS-box protein AGL61... 0.05 Orthogroups_2024-Update
At2g34440 No alias AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29] 0.03 Orthogroups_2024-Update
At2g45650 No alias AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3] 0.03 Orthogroups_2024-Update
At4g09960 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
At5g20240 No alias Floral homeotic protein PISTILLATA... 0.03 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.02 Orthogroups_2024-Update
At5g60440 No alias Agamous-like MADS-box protein AGL62... 0.03 Orthogroups_2024-Update
At5g60910 No alias Agamous-like MADS-box protein AGL8... 0.03 Orthogroups_2024-Update
Bradi4g34680 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Brara.C00582.1 No alias MADS/AGL-type transcription factor 0.05 Orthogroups_2024-Update
Brara.D00221.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Brara.D02757.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03360.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.H01578.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I02103.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.02G185500 No alias AGAMOUS-like 18 0.03 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.06G117600 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.07G080900 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Glyma.07G081300 No alias AGAMOUS-like 6 0.03 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.04 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.03 Orthogroups_2024-Update
Glyma.10G085100 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Glyma.10G240500 No alias AGAMOUS-like 42 0.04 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.17G081200 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Glyma.18G004700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.20G136600 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU1Hr1G008300.3 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g10504 No alias OsMADS3 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38780 No alias transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g49150 No alias OsMADS17 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g11414 No alias OsMADS58 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g21880 No alias OsMADS74 - MADS-box family gene with M-alpha type-box, expressed 0.02 Orthogroups_2024-Update
MA_211156g0010 No alias (q40885|ag_pethy : 164.0) Floral homeotic protein... 0.03 Orthogroups_2024-Update
MA_35712g0010 No alias (at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all... 0.03 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.02 Orthogroups_2024-Update
Potri.002G062000 No alias AGAMOUS-like 61 0.04 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Potri.004G130900 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.007G115000 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.009G084200 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Potri.013G104900 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s267_56V6 No alias agamous-like protein 0.02 Orthogroups_2024-Update
Seita.3G280400.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G093200.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
Seita.4G163500.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G156800.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G193300.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Sobic.010G221500.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g103550 No alias LOW QUALITY:Transcription factor, MADS-box (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g033990 No alias SRF-type transcription factor (DNA-binding and... 0.03 Orthogroups_2024-Update
Sopen08g021160 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 92 173
No external refs found!