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  5. A4A49_27627

A4A49_27627


Description : expansin-a4


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_27627
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
236978 No alias expansin A16 0.02 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.03 Orthogroups_2024-Update
At1g26770 No alias Expansin A10 [Source:UniProtKB/TrEMBL;Acc:F4HPC1] 0.03 Orthogroups_2024-Update
Bradi2g22290 No alias expansin A1 0.03 Orthogroups_2024-Update
Bradi3g09950 No alias expansin 11 0.03 Orthogroups_2024-Update
Bradi3g59460 No alias expansin A1 0.04 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Glyma.02G109100 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.07G229000 No alias expansin A15 0.03 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.03 Orthogroups_2024-Update
LOC_Os03g06000 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_40671g0010 No alias (q40636|expa2_orysa : 346.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
Mp5g01930.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00006372-RA No alias (at4g01630 : 153.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00011355-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00025835-RA No alias (at1g26770 : 394.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
PSME_00052085-RA No alias (at1g69530 : 372.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.004G080200 No alias expansin A13 0.04 Orthogroups_2024-Update
Potri.005G244100 No alias expansin 11 0.03 Orthogroups_2024-Update
Sobic.004G121900.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc03g115890 No alias expansin 10 0.03 Orthogroups_2024-Update
Sopen06g015410 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen06g017810 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 70 156
IPR007117 Expansin_CBD 167 244
No external refs found!