1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_27721

A4A49_27721


Description : glycine-rich rna-binding protein


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_27721
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_15921 No alias glycine-rich rna-binding protein 4, mitochondrial 0.03 Orthogroups_2024-Update
At5g06210 No alias Small RNA-binding protein 11, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g02570 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.06 Orthogroups_2024-Update
Bradi2g58690 No alias glycine-rich RNA-binding protein 4 0.02 Orthogroups_2024-Update
Brara.D01278.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.G00334.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03194.1 No alias RNA editing factor *(ORRM3) 0.04 Orthogroups_2024-Update
Brara.H01810.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.I04624.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.03G140400 No alias glycine-rich RNA-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.04G012700 No alias cold, circadian rhythm, and rna binding 2 0.03 Orthogroups_2024-Update
Glyma.11G117400 No alias cold, circadian rhythm, and rna binding 2 0.04 Orthogroups_2024-Update
Glyma.13G333700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G093400.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
LOC_Os03g17060 No alias RNA recognition motif containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g46770 No alias RNA recognition motif containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g61990 No alias glycine-rich RNA-binding protein 7, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49440 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g43600 No alias RNA recognition motif containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10430060g0020 No alias (at5g06210 : 98.2) RNA binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
MA_36092g0010 No alias (at5g61030 : 147.0) encodes a glycine-rich RNA binding... 0.03 Orthogroups_2024-Update
PSME_00020927-RA No alias (at3g26420 : 152.0) Zinc finger-containing glycine-rich ... 0.03 Orthogroups_2024-Update
Potri.004G155300 No alias cold, circadian rhythm, and RNA binding 1 0.04 Orthogroups_2024-Update
Potri.008G033000 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Orthogroups_2024-Update
Potri.009G116400 No alias cold, circadian rhythm, and RNA binding 1 0.04 Orthogroups_2024-Update
Potri.010G228700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Orthogroups_2024-Update
Seita.9G021300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g109660 No alias meloidogyne-induced giant cell protein DB275 0.05 Orthogroups_2024-Update
Sopen02g016120 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen02g033510 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.04 Orthogroups_2024-Update
Sopen10g023060 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 77
No external refs found!