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  5. A4A49_27803

A4A49_27803


Description : putative polygalacturonase


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_27803
Cluster HCCA clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
78556 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
At3g16850 No alias Pectin lyase-like superfamily protein... 0.04 Orthogroups_2024-Update
At3g61490 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi2g43750 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A01357.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.A01388.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.B03479.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.C03174.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.E03402.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.G01531.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.I04239.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.05G210900 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G153900 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G244200 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.08G017300 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G071500 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G256100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G179500 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.003G139100 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Potri.004G073900 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G126500.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Seita.4G004900.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sopen05g028340 No alias Glycosyl hydrolases family 28 0.05 Orthogroups_2024-Update
Sopen06g020290 No alias Glycosyl hydrolases family 28 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 138 421
No external refs found!