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  5. A4A49_27951

A4A49_27951


Description : squamosa promoter-binding-like protein 8


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_27951
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_27953 No alias squamosa promoter-binding-like protein 3 0.03 Orthogroups_2024-Update
At3g15270 No alias SPL5 [Source:UniProtKB/TrEMBL;Acc:A0A178VL13] 0.03 Orthogroups_2024-Update
Bradi2g59110 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Bradi4g34667 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Brara.G01764.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03020.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.04G197100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.11G163828 No alias squamosa promoter binding protein-like 9 0.03 Orthogroups_2024-Update
HORVU0Hr1G020810.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU5Hr1G076380.9 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os04g46580 No alias OsSPL7 - SBP-box gene family member, expressed 0.02 Orthogroups_2024-Update
MA_3179g0020 No alias (at1g02065 : 176.0) Encodes an SBP-box gene, a member of... 0.02 Orthogroups_2024-Update
PSME_00036287-RA No alias (at1g02065 : 120.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
PSME_00047223-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s252_40V6 No alias squamosa promoter-binding 0.02 Orthogroups_2024-Update
Seita.2G324900.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen12g018830 No alias SBP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 170 243
No external refs found!