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  5. A4A49_28049

A4A49_28049


Description : putative pectinesterase 8


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_28049
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.04 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.04 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.03 Orthogroups_2024-Update
At5g07430 No alias Probable pectinesterase 50... 0.03 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.A02274.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.B02987.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.F02821.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
GRMZM2G177940 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G422631 No alias pectinesterase 11 0.02 Orthogroups_2024-Update
Glyma.01G066000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G066100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G113700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G076580.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os07g46190 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g12410 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10267810g0010 No alias (at5g47500 : 480.0) Pectin lyase-like superfamily... 0.05 Orthogroups_2024-Update
MA_10428610g0020 No alias (at5g19730 : 384.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
MA_99816g0010 No alias (at2g36710 : 325.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00034460-RA No alias (at5g19730 : 230.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G068400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s67_6V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s67_89V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.3G174200.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.002G138400.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Sobic.002G370300.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.003G292100.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc01g079180 No alias Pectinesterase (AHRD V3.3 *** K4AXG4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc07g065360 No alias Pectinesterase (AHRD V3.3 *** K4CHL4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc12g008530 No alias Pectinesterase (AHRD V3.3 *** K4DBU1_SOLLC) 0.03 Orthogroups_2024-Update
Sopen09g034620 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen12g003480 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 85 374
No external refs found!