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  5. Sopen11g006300

Sopen11g006300


Description : Ankyrin repeats (3 copies)


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g006300
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
A4A49_06014 No alias potassium channel kat3 0.02 Orthogroups_2024-Update
Bradi2g24450 No alias potassium transport 2/3 0.02 Orthogroups_2024-Update
Glyma.14G126500 No alias K+ transporter 1 0.03 Orthogroups_2024-Update
Seita.5G298000.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.04 Orthogroups_2024-Update
Solyc09g005220 No alias Potassium channel (AHRD V3.3 *** S8DA85_9LAMI) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 554 642
IPR000595 cNMP-bd_dom 422 506
IPR021789 KHA_dom 754 824
IPR005821 Ion_trans_dom 82 327
No external refs found!