A4A49_28357

Description : putative mitochondrial protein

Gene families : OG_42_0000042 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_28357
Cluster	HCCA clusters: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g246958	No alias	RNA binding;RNA-directed DNA polymerases	0.02	Orthogroups_2024-Update
Cre06.g278289	No alias	Function unknown	0.01	Orthogroups_2024-Update
HORVU2Hr1G075520.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os05g40110	No alias	retrotransposon protein, putative, unclassified, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g46720	No alias	retrotransposon protein, putative, unclassified, expressed	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0003743	translation initiation factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011488	TIF_2_asu	130	260
IPR000477	RT_dom	551	750
IPR025558	DUF4283	315	382
IPR003029	S1_domain	18	92

External Links

No external refs found!