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  5. A4A49_28411

A4A49_28411


Description : pentatricopeptide repeat-containing protein


Gene families : OG_42_0008587 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008587_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_28411
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G056116 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g18640 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
Mp6g18510.1 No alias psbJ/psbN-translation activator (LPE1) 0.05 Orthogroups_2024-Update
Seita.3G308800.1 No alias psbJ/psbN-translation activator *(LPE1) 0.06 Orthogroups_2024-Update
Sobic.010G249700.1 No alias psbJ/psbN-translation activator *(LPE1) 0.05 Orthogroups_2024-Update
Solyc02g093620 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen02g038250 No alias PPR repeat family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033443 PPR_long 443 571
IPR002885 Pentatricopeptide_repeat 262 306
IPR002885 Pentatricopeptide_repeat 606 654
IPR002885 Pentatricopeptide_repeat 190 211
IPR002885 Pentatricopeptide_repeat 575 603
IPR002885 Pentatricopeptide_repeat 231 260
No external refs found!