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  5. A4A49_28422

A4A49_28422


Description : compass-like h3k4 histone methylase component wdr5a


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_28422
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At2g26490 No alias Protein JINGUBANG [Source:UniProtKB/Swiss-Prot;Acc:O48716] 0.02 Orthogroups_2024-Update
Bradi1g44720 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.A02901.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G022627 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G011990.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_142012g0010 No alias (at1g24130 : 357.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
Potri.003G202700 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc01g109120 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc09g060120 No alias LOW QUALITY:Transducin/WD40 repeat-like superfamily... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 100 126
IPR001680 WD40_repeat 300 326
IPR001680 WD40_repeat 336 367
IPR001680 WD40_repeat 209 238
IPR001680 WD40_repeat 243 278
IPR001680 WD40_repeat 376 420
No external refs found!