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Description : ring-h2 finger protein atl60
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Nicotiana release: A4A49_29026 | |
| Cluster | HCCA clusters: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 441685 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_42691 | No alias | ring-h2 finger protein atl7 | 0.03 | Orthogroups_2024-Update | |
| At1g49200 | No alias | RING-H2 finger protein ATL75... | 0.03 | Orthogroups_2024-Update | |
| At2g42360 | No alias | E3 ubiquitin-protein ligase ATL41... | 0.03 | Orthogroups_2024-Update | |
| At4g09130 | No alias | Putative RING-H2 finger protein ATL37... | 0.03 | Orthogroups_2024-Update | |
| At5g10380 | No alias | E3 ubiquitin-protein ligase RING1... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g49152 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g05840 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g32700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.E00038.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.H00897.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I04330.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G386584 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G214600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G081290.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G080020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| MA_10244600g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| MA_10432957g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| MA_124750g0010 | No alias | (at5g01880 : 92.8) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_159453g0010 | No alias | (at1g49230 : 134.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_227897g0010 | No alias | (at3g16720 : 112.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| MA_26001g0020 | No alias | (at1g72310 : 117.0) Encodes a putative RING-H2 zinc... | 0.03 | Orthogroups_2024-Update | |
| MA_69343g0010 | No alias | (at1g49230 : 137.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_8693914g0010 | No alias | (at5g05280 : 130.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_9515738g0010 | No alias | (at5g17600 : 145.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G306600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.3G272800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.5G363700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G063750.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G110200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G168900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G157300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc01g066430 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc01g096650 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1) | 0.04 | Orthogroups_2024-Update | |
| Solyc10g011880 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g028080 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen06g022560 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen07g002500 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen11g001290 | No alias | Ring finger domain | 0.06 | Orthogroups_2024-Update | |
| Sopen11g001310 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 52 | 94 |
| No external refs found! |