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  5. A4A49_29058

A4A49_29058


Description : histone h2b


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_29058
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
At3g45980 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6] 0.03 Orthogroups_2024-Update
Brara.J01445.1 No alias histone *(H2B) 0.05 Orthogroups_2024-Update
Cre06.g266750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g273850 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274750 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276900 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504550 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre13.g570050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G306258 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G172500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G141600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G173400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Pp1s34_255V6 No alias histone h2b 0.03 Orthogroups_2024-Update
Pp1s56_226V6 No alias histone h2b 0.02 Orthogroups_2024-Update
Sopen05g033890 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g032230 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g003800 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen12g006850 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 6 119
No external refs found!