1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen11g006930

Sopen11g006930


Description : tRNA synthetases class I (I, L, M and V)


Gene families : OG_42_0005214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005214_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g006930
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
153639 No alias tRNA synthetase class I (I, L, M and V) family protein 0.03 Orthogroups_2024-Update
Bradi1g30610 No alias tRNA synthetase class I (I, L, M and V) family protein 0.03 Orthogroups_2024-Update
Pp1s197_25V6 No alias F24G24.120; isoleucyl-tRNA synthetase, putative /... 0.03 Orthogroups_2024-Update
Sobic.010G206300.1 No alias EC_6.1 ligase forming carbon-oxygen bond & isoleucine-tRNA ligase 0.02 Orthogroups_2024-Update
evm.model.tig00020904.57 No alias (at4g10320 : 975.0) tRNA synthetase class I (I, L, M and... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 727 876
IPR002300 aa-tRNA-synth_Ia 303 669
IPR002300 aa-tRNA-synth_Ia 19 269
No external refs found!