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  5. Sopen11g007210

Sopen11g007210


Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen11g007210
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
At4g14300 No alias Heterogeneous nuclear ribonucleoprotein 1... 0.04 Orthogroups_2024-Update
At4g26650 No alias AT4g26650/T15N24_100 [Source:UniProtKB/TrEMBL;Acc:Q8W569] 0.03 Orthogroups_2024-Update
At5g47620 No alias RNA-binding (RRM/RBD/RNP motifs) family protein... 0.03 Orthogroups_2024-Update
Bradi1g23280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Brara.B02995.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G014400 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Glyma.20G201300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G039790.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g38410 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Solyc12g014600 No alias RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) 0.04 Orthogroups_2024-Update
evm.model.contig_2040.6 No alias (at3g07810 : 181.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 105 163
IPR000504 RRM_dom 6 73
No external refs found!