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  5. A4A49_29644

A4A49_29644


Description : e3 ubiquitin-protein ligase cop1


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_29644
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Bradi2g15900 No alias SPA (suppressor of phyA-105) protein family 0.03 Orthogroups_2024-Update
Brara.C02328.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
Glyma.05G214900 No alias SPA1-related 2 0.05 Orthogroups_2024-Update
Glyma.12G224600 No alias SPA1-related 3 0.05 Orthogroups_2024-Update
Glyma.13G276700 No alias SPA1-related 3 0.05 Orthogroups_2024-Update
Glyma.14G049700 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.16G027200 No alias SPA (suppressor of phyA-105) protein family 0.03 Orthogroups_2024-Update
Potri.001G094500 No alias SPA1-related 2 0.02 Orthogroups_2024-Update
Potri.011G119500 No alias SPA1-related 3 0.03 Orthogroups_2024-Update
Pp1s25_325V6 No alias ubiquitin ligase protein 0.03 Orthogroups_2024-Update
Solyc07g063120 No alias Ubiquitin ligase protein cop1, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen08g030290 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 459 496
IPR001680 WD40_repeat 545 581
No external refs found!