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  5. Sopen11g007300

Sopen11g007300


Description : PPR repeat


Gene families : OG_42_0009450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009450_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g007300
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
At3g51320 No alias Pentatricopeptide repeat-containing protein At3g51320... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 227 275
IPR002885 Pentatricopeptide_repeat 302 327
IPR002885 Pentatricopeptide_repeat 170 196
IPR002885 Pentatricopeptide_repeat 484 513
IPR002885 Pentatricopeptide_repeat 330 358
No external refs found!