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  5. A4A49_29826

A4A49_29826


Description : csc1-like protein rxw8


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_29826
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
A4A49_06569 No alias calcium permeable stress-gated cation channel 1 0.02 Orthogroups_2024-Update
At1g69450 No alias Early-responsive to dehydration stress protein (ERD4)... 0.03 Orthogroups_2024-Update
Brara.F00887.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Brara.H02782.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
Glyma.11G152700 No alias Early-responsive to dehydration stress protein (ERD4) 0.04 Orthogroups_2024-Update
HORVU1Hr1G057630.5 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
HORVU2Hr1G063620.3 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
HORVU5Hr1G001670.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Kfl00071_0140 kfl00071_0140_v1.1 (at4g04340 : 511.0) ERD (early-responsive to dehydration... 0.02 Orthogroups_2024-Update
LOC_Os12g43720 No alias early-responsive to dehydration protein-related,... 0.03 Orthogroups_2024-Update
MA_99251g0010 No alias (at1g30360 : 376.0) early-responsive to dehydration 4... 0.04 Orthogroups_2024-Update
PSME_00017239-RA No alias (at1g30360 : 733.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update
Potri.004G006000 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Sobic.003G181600.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Sopen07g024540 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1_N 6 163
IPR027815 PHM7_cyt 187 338
IPR003864 RSN1_7TM 349 614
No external refs found!