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  5. A4A49_30304

A4A49_30304


Description : lysine--trna ligase


Gene families : OG_42_0002438 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_30304
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
At3g11710 No alias Lysine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:A0A178VAG3] 0.02 Orthogroups_2024-Update
Bradi1g15370 No alias lysyl-tRNA synthetase 1 0.03 Orthogroups_2024-Update
Mp4g22190.1 No alias lysine-tRNA ligase 0.02 Orthogroups_2024-Update
Pp1s108_187V6 No alias lysyl-trna synthetase 0.02 Orthogroups_2024-Update
Sopen06g029710 No alias tRNA synthetases class II (D, K and N) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 218 567
IPR004365 NA-bd_OB_tRNA 98 179
No external refs found!