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  5. A4A49_30512

A4A49_30512


Description : ring-h2 finger protein atl54


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_30512
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_37314 No alias e3 ubiquitin-protein ligase atl9 0.02 Orthogroups_2024-Update
Brara.A00708.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.04 Orthogroups_2024-Update
Glyma.10G156500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G170300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G112200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G212000 No alias AtL5 0.03 Orthogroups_2024-Update
HORVU3Hr1G081290.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_96368g0010 No alias (at5g17600 : 180.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00003015-RA No alias (at3g05200 : 122.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00011913-RA No alias (at3g51430 : 162.0) Although this enzyme is predicted to... 0.02 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G306600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g082690 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.04 Orthogroups_2024-Update
Solyc09g075320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) 0.03 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g042260 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen04g036320 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen12g031590 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00020684.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 148 191
No external refs found!