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  5. A4A49_30757

A4A49_30757


Description : protein involved in de novo 2


Gene families : OG_42_0000478 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_30757
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G269000 No alias XH/XS domain-containing protein 0.05 Orthogroups_2024-Update
Solyc05g054420 No alias XH/XS domain-containing family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen06g032600 No alias XH domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005380 XS_domain 674 783
IPR005379 Uncharacterised_XH 1058 1185
IPR005381 Znf-XS_domain 433 476
IPR005381 Znf-XS_domain 199 242
IPR005381 Znf-XS_domain 518 561
IPR005381 Znf-XS_domain 599 640
IPR005381 Znf-XS_domain 278 321
IPR005381 Znf-XS_domain 359 399
IPR005381 Znf-XS_domain 120 163
IPR005381 Znf-XS_domain 43 84
No external refs found!