A4A49_31160

Description : zinc finger ccch domain-containing protein 5

Gene families : OG_42_0001056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_31160
Cluster	HCCA clusters: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G031827	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.04	Orthogroups_2024-Update
Sobic.003G250500.2	No alias	small subunit of U2AF pre-RNA splicing auxiliary factor complex	0.02	Orthogroups_2024-Update
Solyc01g103090	No alias	Zinc finger transcription factor 14	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	357	384
IPR000571	Znf_CCCH	227	247
IPR000504	RRM_dom	291	347

External Links

No external refs found!