A4A49_31385

Description : serinearginine-rich sc35-like splicing factor scl30a

Gene families : OG_42_0000852 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_31385
Cluster	HCCA clusters: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Brara.F00039.1	No alias	RNA splicing factor *(SCL28/30/33)	0.03	Orthogroups_2024-Update
MA_63040g0010	No alias	(at1g55310 : 80.5) Encodes a SR spliceosome protein that...	0.02	Orthogroups_2024-Update
Potri.010G203200	No alias	SC35-like splicing factor 30	0.03	Orthogroups_2024-Update
Sobic.001G358000.1	No alias	RNA splicing factor *(SCL28/30/33)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	40	84
IPR000504	RRM_dom	115	157

External Links

No external refs found!