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  5. Sopen11g009060

Sopen11g009060


Description : WD domain, G-beta repeat


Gene families : OG_42_0003958 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g009060
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
269383 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g14097 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B03300.1 No alias component *(eIF3i) of eIF3 mRNA-to-PIC binding complex 0.06 Orthogroups_2024-Update
Cre03.g194400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G028834 No alias Transducin/WD40 repeat-like superfamily protein 0.08 Orthogroups_2024-Update
Glyma.09G234100 No alias Transducin/WD40 repeat-like superfamily protein 0.09 Orthogroups_2024-Update
Glyma.12G002900 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G040280.4 No alias component *(eIF3i) of eIF3 mRNA-to-PIC binding complex 0.12 Orthogroups_2024-Update
Kfl00292_0180 kfl00292_0180_v1.... (at2g46290 : 457.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
LOC_Os05g16660 No alias WD domain, G-beta repeat domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g21660 No alias WD domain, G-beta repeat domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10429304g0010 No alias (at2g46280 : 310.0) Encodes a homolog of mammalian... 0.03 Orthogroups_2024-Update
Mp2g16930.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.02 Orthogroups_2024-Update
Potri.008G141400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G100100 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Pp1s65_136V6 No alias eukaryotic translation initiation factor 3 delta subunit 0.04 Orthogroups_2024-Update
Seita.2G043400.1 No alias component *(eIF3i) of eIF3 mRNA-to-PIC binding complex 0.12 Orthogroups_2024-Update
Seita.7G289100.1 No alias component *(eIF3i) of eIF3 mRNA-to-PIC binding complex 0.02 Orthogroups_2024-Update
Sobic.002G044000.1 No alias component *(eIF3i) of eIF3 mRNA-to-PIC binding complex 0.13 Orthogroups_2024-Update
Solyc11g017070 No alias Eukaryotic translation initiation factor 3 subunit I... 0.21 Orthogroups_2024-Update
evm.model.contig_2181.2 No alias (at2g46290 : 281.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 7 37
IPR001680 WD40_repeat 43 80
IPR001680 WD40_repeat 140 174
IPR001680 WD40_repeat 189 219
IPR001680 WD40_repeat 284 314
No external refs found!