A4A49_32726

Description : skp1-like protein 1a

Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_32726
Cluster	HCCA clusters: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g501200	No alias	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	0.02	Orthogroups_2024-Update
Kfl00055_0100	kfl00055_0100_v1.1	(at5g42190 : 233.0) Similar to SKP1 in yeast and humans...	0.02	Orthogroups_2024-Update
MA_10249530g0010	No alias	(at5g42190 : 161.0) Similar to SKP1 in yeast and humans...	0.03	Orthogroups_2024-Update
MA_82940g0020	No alias	(at5g42190 : 196.0) Similar to SKP1 in yeast and humans...	0.04	Orthogroups_2024-Update
evm.model.tig00001187.19	No alias	(at5g42190 : 173.0) Similar to SKP1 in yeast and humans...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	107	154
IPR016073	Skp1_comp_POZ	5	64

External Links

No external refs found!