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  5. A4A49_32794

A4A49_32794


Description : cyclic nucleotide-gated ion channel 1


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_32794
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
84488 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
At1g15990 No alias Putative cyclic nucleotide-gated ion channel 7... 0.03 Orthogroups_2024-Update
At4g01010 No alias Putative cyclic nucleotide-gated ion channel 13... 0.02 Orthogroups_2024-Update
Brara.J01954.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.04 Orthogroups_2024-Update
Glyma.12G219000 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
MA_10431327g0020 No alias (at5g54250 : 177.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
Potri.006G127300 No alias cyclic nucleotide-gated channel 6 0.04 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Pp1s211_70V6 No alias T3B23.7; cyclic nucleotide-regulated ion channel,... 0.02 Orthogroups_2024-Update
Sobic.003G317700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sopen03g028910 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen06g005020 No alias Integrase core domain 0.02 Orthogroups_2024-Update
Sopen08g022780 No alias Ion transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 84 405
IPR000595 cNMP-bd_dom 498 586
No external refs found!