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  5. A4A49_32927

A4A49_32927


Description : pentatricopeptide repeat-containing protein


Gene families : OG_42_0002876 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002876_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_32927
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
At3g23020 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.03 Orthogroups_2024-Update
Glyma.20G197300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G017060.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g28900 No alias PPR repeat domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Solyc09g083110 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 252 280
IPR002885 Pentatricopeptide_repeat 286 315
IPR002885 Pentatricopeptide_repeat 764 792
IPR002885 Pentatricopeptide_repeat 798 827
IPR002885 Pentatricopeptide_repeat 717 751
IPR002885 Pentatricopeptide_repeat 447 494
IPR002885 Pentatricopeptide_repeat 660 703
IPR002885 Pentatricopeptide_repeat 379 424
IPR002885 Pentatricopeptide_repeat 832 872
IPR002885 Pentatricopeptide_repeat 590 633
No external refs found!