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  5. A4A49_32955

A4A49_32955


Description : putative pectinesterase 53


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_32955
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Brara.B00244.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I05452.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.16G083600 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
MA_10428610g0020 No alias (at5g19730 : 384.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Mp1g00190.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00014679-RA No alias (at5g19730 : 298.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00015802-RA No alias (at5g19730 : 209.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00020050-RA No alias (at2g21610 : 321.0) pectinesterase 11 (PE11); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.014G117100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G068400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s67_89V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.3G333900.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.002G138400.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.002G370300.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.02 Orthogroups_2024-Update
Sopen08g027120 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen12g003480 No alias Pectinesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 80 365
No external refs found!