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  5. Sopen11g009290

Sopen11g009290


Description : PPR repeat family


Gene families : OG_42_0009851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g009290
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Solyc11g017370 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 189 229
IPR002885 Pentatricopeptide_repeat 496 543
IPR002885 Pentatricopeptide_repeat 395 440
IPR002885 Pentatricopeptide_repeat 79 128
IPR002885 Pentatricopeptide_repeat 597 644
IPR002885 Pentatricopeptide_repeat 295 320
No external refs found!