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  5. Sopen11g009450

Sopen11g009450


Description : Glycosyl hydrolases family 35


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g009450
Cluster HCCA clusters: Cluster_390

Target Alias Description ECC score Gene Family Method Actions
A4A49_07022 No alias beta-galactosidase 7 0.03 Orthogroups_2024-Update
A4A49_21231 No alias beta-galactosidase 13 0.03 Orthogroups_2024-Update
A4A49_36090 No alias beta-galactosidase 16 0.02 Orthogroups_2024-Update
At2g28470 No alias Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4] 0.02 Orthogroups_2024-Update
At4g35010 No alias Beta-galactosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV1] 0.03 Orthogroups_2024-Update
Brara.G01582.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Potri.002G080700 No alias beta-galactosidase 16 0.02 Orthogroups_2024-Update
Potri.004G036000 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
Sobic.001G433200.1 No alias beta-galactosidase *(BGAL8) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 727 804
IPR025300 BetaGal_jelly_roll_dom 597 679
IPR031330 Gly_Hdrlase_35_cat 27 334
No external refs found!