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  5. Sopen11g010050

Sopen11g010050


Description : PA domain


Gene families : OG_42_0001930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g010050
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G126230.3 No alias storage vacuole protein sorting receptor *(RMR) 0.02 Orthogroups_2024-Update
LOC_Os03g07130 No alias RING finger protein 13, putative, expressed 0.04 Orthogroups_2024-Update
MA_10437113g0010 No alias (at1g71980 : 297.0) Protease-associated (PA) RING/U-box... 0.02 Orthogroups_2024-Update
Pp1s28_303V6 No alias embr-h2 protein expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003137 PA_domain 83 141
IPR001841 Znf_RING 233 276
No external refs found!