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  5. A4A49_34874

A4A49_34874


Description : putative carotenoid cleavage dioxygenase 4, chloroplastic


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_34874
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
165469 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
At1g78390 No alias 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic... 0.03 Orthogroups_2024-Update
At3g14440 No alias 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic... 0.04 Orthogroups_2024-Update
At3g63520 No alias Carotenoid 9,10(9',10')-cleavage dioxygenase 1... 0.03 Orthogroups_2024-Update
At4g18350 No alias 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
Brara.A03189.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.I04483.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.03 Orthogroups_2024-Update
Glyma.08G096200 No alias nine-cis-epoxycarotenoid dioxygenase 5 0.03 Orthogroups_2024-Update
HORVU6Hr1G068720.4 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
MA_10434448g0010 No alias (at3g14440 : 592.0) Encodes ... 0.03 Orthogroups_2024-Update
MA_90573g0010 No alias (at4g19170 : 622.0) chloroplast-targeted member of a... 0.03 Orthogroups_2024-Update
PSME_00053495-RA No alias (at3g14440 : 677.0) Encodes ... 0.02 Orthogroups_2024-Update
PSME_00056181-RA No alias (at3g14440 : 662.0) Encodes ... 0.02 Orthogroups_2024-Update
Potri.001G265900 No alias carotenoid cleavage dioxygenase 1 0.06 Orthogroups_2024-Update
Pp1s118_231V6 No alias MAA21.150; 9-cis-epoxycarotenoid dioxygenase /... 0.02 Orthogroups_2024-Update
Pp1s12_317V6 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Pp1s132_26V6 No alias carotenoid cleavage dioxygenase 0.05 Orthogroups_2024-Update
Seita.1G288400.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.05 Orthogroups_2024-Update
Sobic.004G268500.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
Solyc08g075490 No alias 9-cis-epoxycarotenoid dioxygenase, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g034310 No alias Retinal pigment epithelial membrane protein 0.04 Orthogroups_2024-Update
Sopen07g029920 No alias Retinal pigment epithelial membrane protein 0.05 Orthogroups_2024-Update
Sopen08g024140 No alias Retinal pigment epithelial membrane protein 0.06 Orthogroups_2024-Update
evm.model.tig00001071.14 No alias (at3g63520 : 102.0) Encodes a protein with... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 120 588
No external refs found!