1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_35794

A4A49_35794


Description : 40s ribosomal protein s5-2


Gene families : OG_42_0002111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002111_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_35794
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
164593 No alias ribosomal protein 5A 0.03 Orthogroups_2024-Update
Bradi2g03760 No alias ribosomal protein 5A 0.04 Orthogroups_2024-Update
Bradi4g41050 No alias ribosomal protein 5B 0.04 Orthogroups_2024-Update
Brara.A03377.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.C01872.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.C03392.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.E00779.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Brara.E02892.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre06.g290950 No alias ribosomal protein 5B 0.09 Orthogroups_2024-Update
GRMZM2G078985 No alias ribosomal protein 5A 0.04 Orthogroups_2024-Update
Glyma.02G167900 No alias ribosomal protein 5B 0.03 Orthogroups_2024-Update
Glyma.09G103400 No alias ribosomal protein 5B 0.08 Orthogroups_2024-Update
Glyma.13G300300 No alias ribosomal protein 5B 0.02 Orthogroups_2024-Update
HORVU3Hr1G015190.2 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Kfl00737_0010 kfl00737_0010_v1.1 (o65731|rs5_cicar : 338.0) 40S ribosomal protein S5... 0.03 Orthogroups_2024-Update
Mp3g10570.1 No alias component RPS5 of SSU proteome 0.08 Orthogroups_2024-Update
Potri.006G197700 No alias ribosomal protein 5B 0.03 Orthogroups_2024-Update
Pp1s10_385V6 No alias 40s ribosomal protein s5 0.08 Orthogroups_2024-Update
Pp1s114_143V6 No alias 40s ribosomal protein s5 0.02 Orthogroups_2024-Update
Pp1s400_33V6 No alias 40s ribosomal protein s5 0.02 Orthogroups_2024-Update
Seita.5G065000.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Seita.8G114300.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G109600.2 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Solyc10g078620 No alias Ribosomal protein S5/S7 (AHRD V3.3 *** A0A103XH68_CYNCS) 0.11 Orthogroups_2024-Update
Solyc11g042610 No alias Ribosomal protein S5/S7 (AHRD V3.3 *** A0A103XH68_CYNCS) 0.07 Orthogroups_2024-Update
Sopen10g029250 No alias Ribosomal protein S7p/S5e 0.1 Orthogroups_2024-Update
Sopen11g018760 No alias Ribosomal protein S7p/S5e 0.03 Orthogroups_2024-Update
evm.model.contig_670.1 No alias (o65731|rs5_cicar : 298.0) 40S ribosomal protein S5... 0.11 Orthogroups_2024-Update
evm.model.tig00021332.10 No alias (o65731|rs5_cicar : 303.0) 40S ribosomal protein S5... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 65 210
No external refs found!