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  5. A4A49_35982

A4A49_35982


Description : ultraviolet-b receptor uvr8


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_35982
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
112120 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
At3g47660 No alias Regulator of chromosome condensation (RCC1) family... 0.04 Orthogroups_2024-Update
Cre16.g691050 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
Glyma.03G040800 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Glyma.08G302000 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
PSME_00001887-RA No alias (at5g19420 : 1094.0) Regulator of chromosome... 0.02 Orthogroups_2024-Update
Solyc02g081250 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen03g035290 No alias Regulator of chromosome condensation (RCC1) repeat 0.03 Orthogroups_2024-Update
Sopen12g034380 No alias Regulator of chromosome condensation (RCC1) repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001849 PH_domain 16 123
IPR000306 Znf_FYVE 628 694
IPR000408 Reg_chr_condens 471 520
IPR000408 Reg_chr_condens 523 572
IPR000408 Reg_chr_condens 354 405
IPR000408 Reg_chr_condens 302 350
IPR000408 Reg_chr_condens 577 624
IPR000408 Reg_chr_condens 409 457
IPR013591 Brevis_radix_dom 1045 1100
IPR027988 BRX_N 878 910
No external refs found!