1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_36556

A4A49_36556


Description : 50s ribosomal protein l17, chloroplastic


Gene families : OG_42_0005563 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005563_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_36556
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Bradi1g04130 No alias Ribosomal protein L17 family protein 0.05 Orthogroups_2024-Update
Brara.G01626.1 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Brara.I03693.1 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Cre02.g108850 No alias Ribosomal protein L17 family protein 0.09 Orthogroups_2024-Update
GRMZM2G108643 No alias Ribosomal protein L17 family protein 0.07 Orthogroups_2024-Update
Glyma.11G201700 No alias Ribosomal protein L17 family protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G111640.1 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Kfl00372_0120 kfl00372_0120_v1.1 (at3g54210 : 186.0) Ribosomal protein L17 family... 0.1 Orthogroups_2024-Update
Mp8g05860.1 No alias component psRPL17 of large ribosomal subunit proteome 0.02 Orthogroups_2024-Update
Potri.016G143100 No alias Ribosomal protein L17 family protein 0.07 Orthogroups_2024-Update
Pp1s37_63V6 No alias ribosomal protein l17-like protein 0.02 Orthogroups_2024-Update
Pp1s74_265V6 No alias ribosomal protein l17-like protein 0.1 Orthogroups_2024-Update
Seita.9G039000.1 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Sobic.001G040000.2 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Solyc06g082750 No alias 50S ribosomal protein L17 (AHRD V3.3 *** A0A072UXJ8_MEDTR) 0.04 Orthogroups_2024-Update
Sopen06g034110 No alias Ribosomal protein L17 0.09 Orthogroups_2024-Update
evm.model.tig00000889.52 No alias (at3g54210 : 159.0) Ribosomal protein L17 family... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 105 201
No external refs found!