A4A49_36560

Description : e3 ubiquitin-protein ligase upl5

Gene families : OG_42_0001767 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001767_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_36560
Cluster	HCCA clusters: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Kfl00007_0260	kfl00007_0260_v1.1	(at4g12570 : 238.0) Knock-out mutants showed accelerated...	0.02	Orthogroups_2024-Update
Solyc09g005160	No alias	E3 ubiquitin-protein ligase-like protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc11g012330	No alias	E3 ubiquitin-protein ligase-like protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin_dom	47	128
IPR000569	HECT_dom	534	848

External Links

No external refs found!