A4A49_36605

Description : apo protein 2, chloroplastic

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_36605
Cluster	HCCA clusters: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g21780	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.02	Orthogroups_2024-Update
Brara.I00675.1	No alias	organelle RNA splicing factor *(APO)	0.03	Orthogroups_2024-Update
GRMZM2G063473	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.03	Orthogroups_2024-Update
Seita.7G236600.1	No alias	organelle RNA splicing factor *(APO)	0.03	Orthogroups_2024-Update
Seita.7G247200.1	No alias	organelle RNA splicing factor *(APO)	0.02	Orthogroups_2024-Update
Sopen08g028600	No alias	APO RNA-binding	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	71	264
IPR023342	APO_dom	300	414

External Links

No external refs found!