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  5. A4A49_36773

A4A49_36773


Description : germacrene c synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_36773
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
At1g70080 No alias Dolabella-3,7-dien-18-ol synthase TPS06... 0.03 Orthogroups_2024-Update
Bradi3g15956 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Bradi4g04965 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g04987 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G177098 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
HORVU5Hr1G004370.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
LOC_Os01g23530 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g27540 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g27790 No alias terpene synthase, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os08g04500 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.019G045400 No alias terpene synthase 21 0.04 Orthogroups_2024-Update
Potri.T000400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G048400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.6G048800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Seita.6G048900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.01 Orthogroups_2024-Update
Seita.6G066400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Seita.8G155600.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.002G065500.2 No alias EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Sobic.002G065600.2 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G133900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.009G009000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Solyc01g101210 No alias viridiflorene synthase 0.04 Orthogroups_2024-Update
Solyc01g101220 No alias Viridiflorene synthase (AHRD V3.3 *-* TPS32_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g059910 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g059930 No alias sesquiterpene synthase 1 0.03 Orthogroups_2024-Update
Solyc07g052120 No alias Sesquiterpene synthase (AHRD V3.3 *-* G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update
Solyc12g006570 No alias Sesquiterpene synthase (AHRD V3.3 *** G5CV52_SOLLC) 0.04 Orthogroups_2024-Update
Sopen12g002520 No alias Terpene synthase family, metal binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 224 489
IPR001906 Terpene_synth_N 23 193
No external refs found!