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  5. A4A49_37314

A4A49_37314


Description : e3 ubiquitin-protein ligase atl9


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_37314
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_09089 No alias ring-h2 finger protein atl57 0.05 Orthogroups_2024-Update
A4A49_09451 No alias ring-h2 finger protein atl72 0.03 Orthogroups_2024-Update
A4A49_30512 No alias ring-h2 finger protein atl54 0.02 Orthogroups_2024-Update
A4A49_40392 No alias ring-h2 finger protein atl58 0.05 Orthogroups_2024-Update
At1g72220 No alias RING-H2 finger protein ATL54... 0.02 Orthogroups_2024-Update
At2g35910 No alias RING-H2 finger protein ATL70... 0.02 Orthogroups_2024-Update
At5g17600 No alias RING-H2 finger protein ATL52... 0.01 Orthogroups_2024-Update
At5g47610 No alias At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] 0.01 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00708.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.03 Orthogroups_2024-Update
Brara.B02007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Brara.E00038.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.G00998.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H00317.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I02379.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J02316.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.J02480.1 No alias Unknown function 0.01 Orthogroups_2024-Update
GRMZM2G041344 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G135011 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G340444 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G480106 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.01G157400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G175400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G001600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G214600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G014500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G060500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G176200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G231900 No alias RING/U-box superfamily protein 0.08 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G028310.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G080840.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
HORVU5Hr1G079940.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Kfl00495_0060 kfl00495_0060_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
LOC_Os01g11460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g11450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10436028g0010 No alias (at5g01880 : 117.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_17362g0010 No alias (at5g06490 : 90.5) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_786911g0010 No alias (at1g53820 : 92.8) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
Potri.001G400600 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.003G093100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G113200 No alias receptor homology region transmembrane domain ring H2... 0.01 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.01 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.009G110000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G157000 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.019G043900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s38_53V6 No alias ring-h2 finger protein 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.1G275700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.3G074900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.9G410900.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G299800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G339400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.004G170300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G193000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g088450 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G53820.1) 0.04 Orthogroups_2024-Update
Solyc01g096650 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1) 0.03 Orthogroups_2024-Update
Solyc11g005290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Sopen01g002900 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen01g035320 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen01g040370 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen08g025350 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001320 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!