A4A49_37554

Description : trna dimethylallyltransferase 2

Gene families : OG_42_0000391 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000391_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_37554
Cluster	HCCA clusters: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
Brara.G00714.1	No alias	IP-type-cytokinin synthase *(IPT) & EC_2.5 transferase...	0.01	Orthogroups_2024-Update
Glyma.03G151800	No alias	isopentenyltransferase 3	0.04	Orthogroups_2024-Update
Glyma.07G256700	No alias	isopentenyltransferase 5	0.02	Orthogroups_2024-Update
Glyma.08G364900	No alias	isopentenyltransferase 5	0.05	Orthogroups_2024-Update
Glyma.20G116500	No alias	isopentenyltransferase 1	0.02	Orthogroups_2024-Update
Seita.9G042300.1	No alias	IP-type-cytokinin synthase *(IPT) & EC_2.5 transferase...	0.02	Orthogroups_2024-Update
Sobic.003G261700.1	No alias	IP-type-cytokinin synthase *(IPT) & EC_2.5 transferase...	0.02	Orthogroups_2024-Update
Sopen09g026610	No alias	IPP transferase	0.02	Orthogroups_2024-Update
Sopen11g010000	No alias	IPP transferase	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018022	IPT	97	392

External Links

No external refs found!