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  5. Solyc02g092020

Solyc02g092020


Description : F-box protein SKIP23 (AHRD V3.3 *** A0A151TCP0_CAJCA)


Gene families : OG_42_0000263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g092020
Cluster HCCA clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
Brara.B01351.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g37060 No alias OsFBDUF52 - F-box and DUF domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.004G137700 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 Orthogroups_2024-Update
Seita.3G248400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G056600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g115420 No alias F-box family protein (AHRD V3.3 *** B9H429_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 241 298
No external refs found!