1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_38153

A4A49_38153


Description : e3 ubiquitin-protein ligase rma1h1


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_38153
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_59241 No alias e3 ubiquitin-protein ligase rma1h1 0.05 Orthogroups_2024-Update
Bradi4g00760 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G073700 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G011730.2 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.06 Orthogroups_2024-Update
MA_127251g0010 No alias (at1g19310 : 231.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Sobic.008G188700.3 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
Solyc07g063200 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1) 0.02 Orthogroups_2024-Update
Solyc10g008400 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G74990.1) 0.06 Orthogroups_2024-Update
Solyc10g051270 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G23780.3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 37 85
No external refs found!