A4A49_38890

Description : hypothetical protein

Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_38890
Cluster	HCCA clusters: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
At5g62460	No alias	RING/FYVE/PHD zinc finger superfamily protein...	0.03	Orthogroups_2024-Update
Brara.F01745.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
PSME_00004790-RA	No alias	(at3g47550 : 182.0) RING/FYVE/PHD zinc finger...	0.03	Orthogroups_2024-Update
PSME_00029909-RA	No alias	(at3g47550 : 228.0) RING/FYVE/PHD zinc finger...	0.01	Orthogroups_2024-Update
Seita.5G026700.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Seita.5G412000.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	80	194
IPR011016	Znf_RING-CH	27	74

External Links

No external refs found!