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  5. A4A49_38924

A4A49_38924


Description : putative pectinesterase 53


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_38924
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
At1g05310 No alias Probable pectinesterase 8... 0.03 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.I05452.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os01g53990 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_28575g0010 No alias (at5g47500 : 447.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Mp1g17560.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00020051-RA No alias (at5g19730 : 262.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00033773-RA No alias (at2g36710 : 272.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s236_72V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s67_89V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.003G231500.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.005G217101.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc07g043240 No alias Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC) 0.04 Orthogroups_2024-Update
Sopen02g029180 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.05 Orthogroups_2024-Update
Sopen07g033560 No alias Pectinesterase 0.04 Orthogroups_2024-Update
Sopen09g034620 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen10g033270 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 94 385
No external refs found!